PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_06289
Common NameKK1_006466
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 178aa    MW: 19047.4 Da    PI: 4.6566
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_06289genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-171261255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                   +y+GVr++  +g+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  C.cajan_06289 12 CYRGVRRRA-NGKWVSEIREPK----KpNRIWLGTFPTPEMAAVAYDVAALALKG 61
                   69****887.8*********94....468***********************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.1E-321275IPR001471AP2/ERF domain
PROSITE profilePS5103222.6031269IPR001471AP2/ERF domain
SuperFamilySSF541714.12E-211271IPR016177DNA-binding domain
PfamPF008471.1E-101261IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-301371IPR001471AP2/ERF domain
PRINTSPR003674.9E-111324IPR001471AP2/ERF domain
CDDcd000181.19E-321371No hitNo description
PRINTSPR003674.9E-115171IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MHPSSSKGFS GCYRGVRRRA NGKWVSEIRE PKKPNRIWLG TFPTPEMAAV AYDVAALALK  60
GKNAELNFPD SASSLPVPAS LSAHDIQVAA AAAAAAAGAA KDAMRTQAED NNVSAAQEKQ  120
TAVMSSNQFV DEDLIFDMPN VLINMAEGML LSPPPFDIGG EPNTPENMEQ ETSLWNFP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-141374668ATERF1
3gcc_A1e-141374668ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003537044.21e-91PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR02e-51ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A151U3D91e-129A0A151U3D9_CAJCA; Ethylene-responsive transcription factor ERF024 family
STRINGGLYMA10G07740.23e-91(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.15e-34ERF family protein